histone modification marker

  • H3K4me1- primed enhancers – broad peaks
  • H3K4me3-promoters – sharp peaks
  • H3K9me2-transcriptional repression – broad peaks
  • H3K9me3-heterochromatin – broad peaks
  • H3K9ac-actively transcribed promoters – sharp peaks
  • H3K14ac actively transcribed promoters
  • H3K27me3-polycomb repression, silenced genes – broad peaks
  • H3K27ac-activate promoter or enhancer – sharp peaks
  • H3K36me3-gene bodies – broad peaks
  • the peak type may be mixed, double check by IGV

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